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Artificial Intelligence User Guide

Generative Artificial Intelligence (GAI), particularly through a wide variety of technologies—most notably Large Language Models (LLMs)—is rapidly being integrated into academic research, teaching, and administrative processes. These tools offer researchers and educators significant efficiency gains through functions such as text generation, code writing, image generation, data summarization, and language translation.

However, the uncontrolled or uninformed use of GAI technologies can give rise to serious ethical and legal risks, such as scientific misrepresentation, plagiarism, data privacy violations, copyright infringement, and algorithmic bias. This situation necessitates a clear, actionable, and enforceable guidance framework at the institutional level.

This guide has been prepared to support Yıldız Technical University academic staff in using AI tools in an ethical, responsible, and legally compliant manner. The rules and recommendations in this guide have been developed based on the relevant TÜBİTAK guide, the TÜBİTAK AYEK Regulation, the Personal Data Protection Law No. 6698 (KVKK), and the relevant ethics guide of the Council of Higher Education (YÖK).

Key Sources on Which the Guide Is Based

TÜBİTAK - Guide on the Responsible and Trustworthy Use of Generative Artificial Intelligence (AI) in Support Processes (January 2026) (https://tubitak.gov.tr/sites/default/files/2025-10/UYZ_Rehberi_v03_TR.pdf)

TÜBİTAK Research and Publication Ethics Board (AYEK) Regulation (https://tubitak.gov.tr/sites/default/files/2024-06/tubitak_arastirma_ve_yayin_kurulu_yonetmeligi.pdf)

Law No. 6698 on the Protection of Personal Data (KVKK) (https://mevzuat.gov.tr/MevzuatMetin/1.5.6698.pdf)

1. Purpose, Scope, and Basic Definitions of the Guide

1.1. Purpose and Scope

The primary purpose of this guide is to explain to the academic staff of Yıldız Technical University, through concrete examples, under what conditions and how generative AI tools can be used within the scope of educational and research activities; which uses are restricted or prohibited; and why and how the disclosure of such use is mandatory. This guide aims to safeguard research integrity, ensure fairness and transparency in evaluation processes, ensure compliance with legal obligations regarding the protection of personal data, and safeguard intellectual property rights.

This guide applies to researchers, faculty members, research assistants, and all academic staff conducting projects within the university. This guide may be used as a reference for project applications submitted to funding agencies, including TÜBİTAK; in peer review and panel evaluation tasks; in the preparation of course materials; and in scientific publishing activities.

1.2. Basic Definitions

ConceptExplanation
Generative Artificial Intelligence (GAI)Artificial intelligence systems trained on large datasets that can generate new content—such as text, computer code, images, audio, and synthetic data—based on user prompts. Examples of models in this category include ChatGPT, Claude, Gemini, and DeepSeek.
Research IntegrityAdherence to the principles of honesty, accuracy, objectivity, and accountability throughout the processes of proposing, conducting, and publishing research. Fabrication, falsification, and plagiarism constitute the most fundamental violations of this principle.
PlagiarismThe use of others’ ideas, methods, data, writings, and figures as one’s own without properly citing the original authors or obtaining permission when required.
HallucinationA situation in which AI systems, due to gaps or internal limitations in training data, produce outputs (references, data, facts, etc.) that sound plausible but are in fact incorrect, meaningless, or fabricated.
Personal Data (KVKK)Any information relating to an identified or identifiable natural person. This includes names, contact information, resumes, academic records, and participant data collected as part of research.
Intellectual and Industrial PropertyThese are the legal rights pertaining to intellectual products arising during the research process, such as inventions, patents, designs, works, technical knowledge, and trade secrets. They are protected under various laws, whether or not they are registered.
Algorithmic BiasThis refers to a situation where an artificial intelligence model learns social biases (such as gender, ethnicity, age, etc.) from training data and subsequently reflects or reinforces these biases in the content it generates.

2. Fundamental Principles Underpinning the Guide

The rules and recommendations in this guide are based on the following fundamental principles. All provisions of the guide must be interpreted and applied within the framework of these principles:

  1. Responsibility and Accountability: No matter how advanced AI tools may be, humans always bear ultimate responsibility for the content produced and the decisions made. AI systems cannot be held legally or ethically accountable.
  2. Transparency: The use of AI in support processes and publishing activities must be clearly disclosed. Transparency both supports accountability and strengthens institutional trust in these processes.
  3. Fairness and Non-Discrimination: Measures must be taken to mitigate potential algorithmic biases in AI tools. The use of AI must not provide an unfair advantage to specific individuals or groups.
  4. Privacy and Data Protection: Application proposals, evaluation reports, and research data are confidential. The provisions of the Personal Data Protection Law (KVKK) must be followed when processing personal data; sensitive information must not be entered into AI tools under any circumstances.
  5. Research Integrity and Originality: The use of AI must be conducted in a manner that does not lead to acts of scientific misconduct, such as plagiarism, data fabrication, or data manipulation.
  6. Human-Centered Approach and Oversight: AI systems should be used to support human capabilities; they should not eliminate the human role in decision-making processes. Meaningful human oversight must always be maintained in critical processes.

3. Permitted Uses and Concrete Examples

AI tools may play a supportive role for the following purposes. A disclosure requirement applies to all of these uses (see Section 5). Academic staff will not accept outputs generated by AI systems at face value; they will evaluate the content with a critical eye and verify its accuracy using independent sources. Intellectual responsibility for the final content rests with the user in all cases.

3.1. Language and Style Improvement

Grammar and spelling checks, sentence structure improvements, strengthening of academic style, and foreign language support are considered within this scope. The AI system can be used to enhance the presentation of the text without altering its meaning or original content. However, before these processes are carried out, personal data and third-party intellectual property content must be removed from the input text.

Example Scenario: Linguistic Improvement of an English Article Abstract
 Inappropriate UseAppropriate Use
Command Given"Write an abstract for this article.""Please correct the following draft abstract in terms of English grammar, punctuation, and academic style. Do not change the content: [DRAFT TEXT]"
Results and EvaluationÜYZ generates the abstract from start to finish. The researcher simply copies this output. The generated content does not belong to the researcher; the risk of hallucination and plagiarism is high. Failure to disclose this constitutes an ethical violation.The AI tool performs only linguistic editing; the content remains the researcher’s own. Disclosure: “Language editing was performed using [tool name].” Responsibility for the originality of the content lies with the researcher.
Basic Principle: AI should not be used to generate content; rather, it should be used to enhance the presentation quality of content created by the researcher.

3.2. Literature Review and Summarization

AI can be used to understand general trends in a specific research field, develop research questions, and grasp the main ideas of large text collections. However, none of the references suggested by the AI system (particularly author, year, journal, and title information) should be used under any circumstances without being independently verified in reliable academic databases such as Google Scholar, PubMed, or Web of Science. The tendency of the AI system to generate nonexistent articles as if they were real (hallucination) poses the highest risk in this field.

Warning — Risk of Fake Reference Generation

AI tools can generate nonexistent articles, authors, and journals in an extremely convincing manner.

Example: An article cited as “Smith et al. (2022), in Nature...” may never have been published.

Using such references without verification may constitute the use of fabricated citations under the TÜBİTAK AYEK Regulations and, consequently, an ethical violation.

Example Scenario: Use of AI-Generated Citations in Literature Reviews
 Inappropriate UseProper Use
Given Command"List studies on cancer diagnosis using machine learning between 2020 and 2025, along with their references.""What are the prominent research trends and key sub-problems in the field of cancer diagnosis using machine learning? Provide a general assessment; I will take responsibility for citing references and verifying the information myself."
Results and EvaluationÜYZ generates a reference list; however, a significant portion of the list may consist of articles that have not actually been published. Using it without verification carries the risk of plagiarism and false citations.AI provides a conceptual map to guide the field. Researchers use this information as a starting point and verify the references using independent databases.
Basic Principle: The fundamental rule is to request conceptual guidance regarding the research field from the ÜYZ, not a reference list.

3.3. Coding and Technical Support

ÜYZ can be used to generate data analysis code for the research process, to correct errors in existing code, and to explain the code’s functionality. Additionally, ÜYZ can be tasked with coding solutions planned by the researcher and featuring task separation at the atomic level. The researcher must meticulously review the functional accuracy, efficiency, and potential licensing issues of the generated code. In this regard, having the researcher define test scenarios and expected results and providing these criteria to the ÜYZ as guidelines will enhance the reliability of the process.

Example Scenario: Generating Data Analysis Code
 Inappropriate UseProper Use
Command Given"Write a comprehensive statistics package for me.""Using Pandas and SciPy in Python, write a function that fills in missing values in a CSV file with the median and then performs an independent samples t-test between two groups. Data columns: score, group."
Result and EvaluationÜYZ generates a large and unverified block of code. The researcher uses the code without understanding its logic; the risk of statistical error, security vulnerabilities, and licensing non-compliance is high.ÜYZ generates a targeted function with a limited scope. The researcher reads the code, understands its logic, and tests it. The source of the generated code is specified in the methodology section.
Basic Principle: The coding task should be defined as specifically as possible; the generated code must be validated through testing in every case.

4. Uses Requiring Caution

The following uses involve situations where the AI plays a more central role and therefore carries a higher risk. While the use of AI systems in these areas is not prohibited, the researcher is required to conduct comprehensive validation, clearly demonstrate their original intellectual contribution, and fully disclose its use.

4.1. Creating a Project Proposal or Draft Section of a Paper

Using AI tools to generate draft text for the introduction, methods, literature review, and results sections is a practice that is becoming more common but carries serious risks. The generated texts are often superficial and generic; they may fail to reflect the project’s unique context and may contain fabricated references, unrealistic promises, and factual errors. Using such drafts without sufficient revision by the researcher can pose serious risks.

Warning: Basic Rule Regarding the Use of Draft Texts

Draft texts generated by the AI should never be used as final texts.

The researcher should consider the generated draft solely as a starting point; they must either comprehensively rewrite the content based on their own knowledge and analysis or have it written through a detailed, multi-stage revision process in collaboration with ÜYZ.

All claims and references must be verified using independent sources.

Sample Scenario: Drafting the Introduction Section of a Project Proposal
 Inappropriate UseProper Use
Given Command"Write the introduction section for a project proposal on neuromorphic computing and energy efficiency.""For my introduction, I want to address the following main arguments: [1st argument], [2nd argument], [3rd argument]. Please suggest how I can strengthen the logical flow and transitions between these arguments."
Results and EvaluationThe AI generates a general introductory text. The researcher uses this text with minor modifications. The content is not specific to the researcher; references have not been verified; the tasks to be performed have not been evaluated; intellectual originality cannot be proven.The arguments belong to the researcher; the AI system only offers suggestions regarding presentation style and structure. Academic originality is preserved, and accountability is ensured.
Basic Principle: Ideas and arguments may come from the researcher, and presentation suggestions may come from the AI; however, this order must not be reversed under any circumstances.

4.2. Preparing Instructional Materials and Exam Questions

ÜYZ can be used to create a course presentation outline, a case study scenario, or an exam question. However, the content accuracy, alignment with course learning outcomes, difficulty balance, and originality of the generated materials must be verified by the instructor under all circumstances. The possibility that exam questions generated by ÜYZ may overlap with existing online sources should not be overlooked.

Sample Scenario: Exam Question Generation
 Inappropriate UseAppropriate Use
Given Command"Generate 20 multiple-choice questions for the data structures course.""Generate 3 original multiple-choice questions on linked lists that assess the student’s application of concepts rather than conceptual understanding, with a difficulty level of 'medium.' For each question, specify the rationale for the correct answer and common misconceptions."
Results and EvaluationÜYZ generates 20 questions. Some questions may be incorrect, while others may be too easy or too difficult; some may overlap with questions found in publicly available sources. Unsupervised, mass use compromises the validity of the assessment.ÜYZ generates targeted and well-reasoned questions. The faculty member reviews each question for content accuracy, originality, and alignment with the assessment objectives, and makes any necessary corrections.
Basic Principle: Exam questions generated by ÜYZ should not be used directly without the faculty member’s review, resolution, and approval.

5. Prohibited Uses

The forms of use listed below are strictly prohibited as they clearly violate ethical principles, research integrity, confidentiality obligations, and applicable laws and regulations.

5.1. Plagiarism

It is strictly prohibited to use ÜYZ tools to copy, paraphrase, or present ideas, texts, data, methods, or visual materials belonging to others as one’s own work without citing the source or obtaining permission. Because content generated by AI systems may verbatim reproduce copyrighted works found in educational data, researchers are advised to check AI outputs using plagiarism detection software.

5.2. Fabrication and Falsification of Data

It is strictly prohibited to generate data via the AI system for experiments, measurements, or analyses that were not actually conducted, or to alter existing data or research results. These actions are defined as serious ethical violations.

Example Scenario: Fabrication of Research Data
 Inappropriate UseProper Use
Command Given"Generate a 50-row dataset that appears statistically plausible and demonstrates the relationship between water pH and plant growth."There is no acceptable form of this usage in a research context.
Result and EvaluationÜYZ generates synthetic data that appears realistic. The use of this data in a research publication is considered fabrication under TÜBİTAK AYEK guidelines and results in severe penalties.Research data can only be obtained from actual experiments, observations, or field studies.
Fundamental Principle: Research data can be obtained only and exclusively from real experiments or observations; data generated by AI tools cannot be used as research findings under any circumstances.

5.3. Entering Confidential, Personal, or Unpublished Data into AI Tools

It is strictly prohibited to enter or upload confidential information related to project applications, unpublished research findings, personal data protected under the Personal Data Protection Law (student information, patient data, participant identification information, etc.), or information constituting trade secrets belonging to third parties into AI tools. Data uploaded to publicly accessible third-party ÜYZ platforms may be stored, processed, or used for model training by service providers. This violates both confidentiality obligations and the provisions of the KVKK regarding data processing and cross-border transfers (Article 9).

Example Scenario: Transfer of Student Data to a Machine Learning Platform
 Inappropriate UseProper Use
Command Given"Analyze the grades and attendance data of the following students to predict academic success: [Names, student IDs, and grade information for 250 students...]""Discuss which statistical model is more appropriate for the following anonymized data (student_id, grade, attendance): [ID: 001, Grade: 78, Attendance: 4], [ID: 002, Grade: 55, Abs: 12]"
Results and EvaluationViolation of the Personal Data Protection Law (KVKK). Students’ personal data is being transferred to an external platform without consent. The service provider may store this data or use it for model training. This results in legal liability for the university.Anonymized data that does not contain personal information is being used. Compliance with the KVKK has been ensured; only a methodological discussion is taking place; the actual analysis is being conducted by the researcher in a local environment.
Basic Principle: Under no circumstances should real names, student ID numbers, Turkish ID numbers, or similar personally identifiable information (PII) be entered into AI tools.

6. Disclosure of AI Tool Usage

In accordance with the principles of transparency and accountability, it is mandatory to disclose all AI tool usage that goes beyond basic spelling and grammar checks. This obligation reaffirms the researcher’s responsibility for the accuracy and originality of the content, ensures that reviewers and readers are aware of how the content was produced, and enables the university to monitor trends in AI tool usage.

When making a declaration, the exact version of the AI tool used and the date of use must be specified (e.g., Claude Sonnet 4.6 – March 23, 2026). The reason for specifying the date is that, even if AI models share the same version code, their learned weights change due to continuous learning.

6.1. Disclosure Threshold

The table below provides examples to clarify which uses require a declaration and which do not:

Usage TypeIs a Declaration Required?Example Disclosure Statement
Automatic spelling/grammar checkNo
Text Fluency and Style ImprovementYes"The text was edited using [tool name]."
Literature search guidance or research question developmentYes"The [tool name] was used during the literature review process; all references have been independently verified."
Creating a draft of the project/article sectionYes (detailed)"The first draft of the [section name] section was created using Google Gemini Pro 3.1 between March 20 and March 23, 2026; it was extensively rewritten and verified by the author."
Generating images or figures using AIYes"Figure [N] was generated using [tool name]."
Generating research code or debuggingYes"Data preprocessing code was written with the support of [tool name] and tested by the author."

6.2. Declaration Method

The declaration can be made in the following ways, depending on the context of use:

  • In TÜBİTAK applications: The tool used, its version, and the scope of its use must be entered in the declaration section of the application system designated for this purpose.
  • In scientific publications: Depending on the journal’s policy, it must be included in the “Author Contribution Statement,” “Acknowledgments,” or a separate “Open Access Declaration” section as specified by the journal. Many international journals now require this declaration.
  • In theses and academic papers: The purpose and scope of use must be clearly stated in the preface or methods section.
  • In corporate reports: It should be included at the end of the relevant section or as a footnote.

7. Key Risks and Necessary Precautions

The key risks that applicants may encounter, their descriptions, and the preventive measures to be taken against these risks are summarized in the table below:

RiskDescriptionPreventive Measures
Generation of False InformationThe AI system may generate information, false references, and fabricated data that appear highly convincing but are actually incorrect.All facts, numbers, and references in AI output must be verified using reliable and independent sources; AI output should not be trusted unconditionally.
Algorithmic BiasAI models may reflect societal biases (such as gender, race, age, etc.) present in training data and may lead to unfair elements in research or educational content.Generated content should be reviewed with a critical eye, inclusive language should be used, and, where possible, verification from different perspectives should be ensured.
Intellectual and Industrial Property InfringementAI outputs may reproduce copyrighted material found in training data. Transferring original ideas and unregistered inventions to unsecured platforms may result in intellectual property loss.Direct copying of long blocks of text and images should be avoided; license terms should be verified; and the institution’s intellectual property procedures must be followed.
Data Privacy and KVKK ViolationsPersonal data entered into external AI platforms may be stored, processed, or used in model training by the service provider. This constitutes a violation of data processing regulations under the KVKK and a violation of rules regarding cross-border data transfers.Personal data, confidential research findings, and unpublished information must not be entered into external AI tools under any circumstances; only anonymized or synthetic data should be used.
Violation of Research IntegrityPresenting content generated by AI systems as the researcher’s original contribution may be considered plagiarism, fabrication, or falsification under AYEK and YÖK regulations.Usage must be transparently disclosed; the content must be processed and transformed through the researcher’s original contribution, and the intellectual originality of the text must be preserved.

8. Rules Regarding the Use of AI as an Evaluator and Reviewer

This section applies to all academic staff assuming any evaluator role, including reviewers and panelists evaluating TÜBİTAK applications, members of thesis committees within universities, scholarship evaluation committees, and journal reviewers.

8.1. Fundamental Rule: The Use of ÜYZ in Evaluation Processes Is Strictly Prohibited

TÜBİTAK evaluators are strictly prohibited from using social media platforms for any purpose related to their evaluation duties. This rule applies to all stages of the evaluation and monitoring process, including individual evaluations, panel meetings, reporting, and correspondence. This prohibition is fully consistent with the policies adopted by leading funding agencies such as the NIH, NSF, and the European Research Council (ERC).

Prohibited Actions

Reviewers may not use the ÜYZ tools at any stage, including the following:

  • Analyzing, summarizing, or interpreting the application text using an AI tool,
  • Having an AI tool identify the proposal’s strengths and weaknesses,
  • Having AI generate the entire individual evaluation report or any part thereof,
  • Generating content from the AI tool for panel meeting notes or observer reports,
  • Creating an AI-generated draft for correspondence related to the evaluation (e-mails, reports).

8.2. Legal and Ethical Justifications for the Prohibition

Breach of confidentiality: Project proposals contain unpublished original ideas, methodologies, and personal data belonging to applicants. Uploading any part of this content to external ÜYZ tools violates the evaluator’s confidentiality obligation under TÜBİTAK regulations.

Violation of the Personal Data Protection Law (KVKK): The names, contact information, and CVs of researchers included in the application materials constitute personal data under the KVKK. Transferring this data to external platforms subjects the evaluator to legal liability due to the lack of explicit consent and non-compliance with cross-border transfer rules (Article 9).

Risk of FSM violation: Inventions and original ideas in the evaluated project for which no patent application has yet been filed may indirectly become public knowledge by being included in the training data of the ÜYZ model.

Compromise of evaluation quality and integrity: The TÜBİTAK evaluation process relies on the in-depth knowledge, experience, and critical reasoning skills of subject matter experts. AI tools cannot replace this expert judgment; potential algorithmic biases may negatively affect evaluation results.

Accountability: The lack of transparency regarding the extent to which AI influences the creation of the evaluation report undermines accountability. Responsibility for the final evaluation always rests with humans; AI cannot share this responsibility.

Sanctions under the TÜBİTAK AYEK Regulation: Article 9/1-ı of the AYEK Regulation defines acts of negligence or abuse of duty by those involved in evaluation processes as ethical violations. The use of prohibited AI-based evaluation tools is assessed under this article, and if a violation is found, the necessary sanctions are imposed in accordance with AYEK procedures.

Example Scenario: Use of AI tools while preparing a reviewer report
 Inappropriate UseProper Use
Command Given"Review the project summary below and identify its strengths and weaknesses: [The full text or summary of the application has been copied here]"There is no acceptable form of this usage in the context of evaluation.
Conclusion and EvaluationA privacy breach, a violation of the Personal Data Protection Law (KVKK), and a risk of financial loss occur simultaneously. This may be assessed as “abuse of office” under Article 9/1-ı of the TÜBİTAK AYEK Regulation. An AYEK investigation may be initiated.The evaluation must be based on the evaluator’s expert knowledge and their own independent analysis.
Basic Principle: The use of Generative Artificial Intelligence (GAI) in the role of an evaluator is absolutely prohibited, without exception.
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